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u133a b gene chip microarray profiling  (Thermo Fisher)


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    Structured Review

    Thermo Fisher u133a b gene chip microarray profiling
    U133a B Gene Chip Microarray Profiling, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/microarray+chips+(u133a/pm39594769-57-18-18
    Average 90 stars, based on 1 article reviews
    u133a b gene chip microarray profiling - by Bioz Stars, 2026-10
    90/100 stars

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    Related Articles

    Expressing:

    Article Title: Transcription Factor RUNX1 Regulates Coagulation Factor XIII-A ( F13A1 ): Decreased Platelet-Megakaryocyte F13A1 Expression and Clot Contraction in RUNX1 Haplodeficiency
    Article Snippet: Differences were compared using Student’s t-test or one-and two-way ANOVA, using GraphPad Prism, version 8 (GraphPad Software) and considered significant at P< 0.05. .. Prior expression profiling studies [ ] using Affymetrix U133 Gene Chips showed that platelet F13A1 expression was decreased in our FPDMM patient compared with healthy controls (fold change = 0.30; P=0.006). ..

    Gene Expression:

    Article Title: IRSN-23 gene diagnosis enhances breast cancer subtype classification and predicts response to neoadjuvant chemotherapy: new validation analyses
    Article Snippet: .. Gene expression analysis was performed using Affymetrix U133A Plus 2.0 DNA microarray since the last publication. ..

    Article Title: IRSN-23 gene diagnosis enhances breast cancer subtype classification and predicts response to neoadjuvant chemotherapy: new validation analyses.
    Article Snippet: .. Gene expression analysis was performed using Affymetrix U133A Plus 2.0 DNA microarray since the last publication. ..

    Article Title: Genes Associated with the Immune System Affected by Ionizing Radiation and Estrogen in an Experimental Breast Cancer Model
    Article Snippet: An Affymetrix method was used in 2013 [ ] to determine which genes were affected by estrogen alone, and by ionizing radiation ( ). .. The Affymetrix U133A oligonucleotide microarray (Affymetrix, Santa Clara, CA, USA), which comprises 14,500 genes, was used to assess gene expression in the breast cancer model, which included the cell lines Ct, E, A3, A5, and T2. .. The Affymetrix GeneChip Operating Software (GCOS) v1.0 ST, the Genes@Work software platform, and the discovery algorithm SPLASH (structural pattern localization analysis by sequential histograms), with a false discovery rate of 0.05, were used to quantitatively analyze arrays for gene expression.

    Microarray:

    Article Title: IRSN-23 gene diagnosis enhances breast cancer subtype classification and predicts response to neoadjuvant chemotherapy: new validation analyses
    Article Snippet: .. Gene expression analysis was performed using Affymetrix U133A Plus 2.0 DNA microarray since the last publication. ..

    Article Title: IRSN-23 gene diagnosis enhances breast cancer subtype classification and predicts response to neoadjuvant chemotherapy: new validation analyses.
    Article Snippet: .. Gene expression analysis was performed using Affymetrix U133A Plus 2.0 DNA microarray since the last publication. ..

    Article Title: Development of a prediction model for ctDNA detection (Cir-Predict) in breast cancer.
    Article Snippet: The Qiagen RNeasy® mini kit (QIAGEN Science, Germantown, MD, USA) was used to extract RNA from tumor tissues. .. RNA (200 ng for OUH_1 and 1 μg for OUH_2) was subjected to DNA microarray assay (U133 Plus 2.0 Array; Affymetrix, Santa Clara, CA, USA) following the manufacturer’s instructions. .. Gene Profiling Reagents (Affymetrix) and One Cycle Target Labeling were used for OUH_1.

    Article Title: Development of a prediction model for ctDNA detection (Cir-Predict) in breast cancer
    Article Snippet: The Qiagen RNeasy ® mini kit (QIAGEN Science, Germantown, MD, USA) was used to extract RNA from tumor tissues. .. RNA (200 ng for OUH_1 and 1 μg for OUH_2) was subjected to DNA microarray assay (U133 Plus 2.0 Array; Affymetrix, Santa Clara, CA, USA) following the manufacturer’s instructions. .. Gene Profiling Reagents (Affymetrix) and One Cycle Target Labeling were used for OUH_1.

    Article Title: Genes Associated with the Immune System Affected by Ionizing Radiation and Estrogen in an Experimental Breast Cancer Model
    Article Snippet: An Affymetrix method was used in 2013 [ ] to determine which genes were affected by estrogen alone, and by ionizing radiation ( ). .. The Affymetrix U133A oligonucleotide microarray (Affymetrix, Santa Clara, CA, USA), which comprises 14,500 genes, was used to assess gene expression in the breast cancer model, which included the cell lines Ct, E, A3, A5, and T2. .. The Affymetrix GeneChip Operating Software (GCOS) v1.0 ST, the Genes@Work software platform, and the discovery algorithm SPLASH (structural pattern localization analysis by sequential histograms), with a false discovery rate of 0.05, were used to quantitatively analyze arrays for gene expression.

    other:

    Article Title: Deciphering Nicotine-Driven Oncogenesis in Head and Neck Cancer: Integrative Transcriptomics and Drug Repurposing Insights
    Article Snippet: Affymetrix cDNA microarray (GeneChip Human Genome HG-U133A, Thermo Fisher Scientific) was utilized to compare transcriptomic differences between three parental HNC cell lines and their corresponding nicotine-treated sublines.



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    Description of datasets used in this study

    Journal: Skeletal Muscle

    Article Title: Premature expression of a muscle fibrosis axis in chronic HIV infection

    doi: 10.1186/2044-5040-2-10

    Figure Lengend Snippet: Description of datasets used in this study

    Article Snippet: Arrays for both these studies were run using Affymetrix HG-U133A microarray chips.

    Techniques:

    Muscle age profiling. Heatmaps displaying the relative expression of the ten gene muscle aging profile are shown comparing young males to older males in a supervised manner using Affymetrix U133A microarray gene set data for GSE362 ( A ) and GSE1428 ( B ) and in a healthy aging dataset using a NimbleGen microarray data ( C ). The gene expression of the profile is displayed in a supervised manner where intensity reflects relative expression (green = higher, red = lower) . Heatmaps were generated using the Heatplus package in the statistical software R 2.14.0

    Journal: Skeletal Muscle

    Article Title: Premature expression of a muscle fibrosis axis in chronic HIV infection

    doi: 10.1186/2044-5040-2-10

    Figure Lengend Snippet: Muscle age profiling. Heatmaps displaying the relative expression of the ten gene muscle aging profile are shown comparing young males to older males in a supervised manner using Affymetrix U133A microarray gene set data for GSE362 ( A ) and GSE1428 ( B ) and in a healthy aging dataset using a NimbleGen microarray data ( C ). The gene expression of the profile is displayed in a supervised manner where intensity reflects relative expression (green = higher, red = lower) . Heatmaps were generated using the Heatplus package in the statistical software R 2.14.0

    Article Snippet: Arrays for both these studies were run using Affymetrix HG-U133A microarray chips.

    Techniques: Expressing, Microarray, Generated, Software